Poster | 6th Internet World Congress for Biomedical Sciences |
Monica Acosta(1), Kiyohito Yoshida(2)
(1)(2)Hokkaido University - Sapporo. Japan
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[Cell Biology & Cytology]![]() |
[Genetics & Bioinformatics]![]() |
Drosophila ananassae is a member of the melanogaster species group. In 1984, Dr. Claude W. Hinton discovered and genetically characterized a serie of mutations in D. ananassae which affect almost exclusively the morphology and structure of the adult compound eye. These mutants, called Om for "optic morphology", appear as independent mutational events among the progeny of the ca;px stock or its derivatives. The Om mutants are semidominant, show few pleiotropic effects and have been assigned to at least 22 loci scattered in the genome. Hinton hypothesized that the Om mutability involved the presence of a transposable element which insertion is specific to some sequences shared by a group of genes that express coordinately during eye morphogenesis. These findings raise important questions as to the mechanism and specificity of the Om mutagenic effect. The Om mutations are caused by the insertion of a retrotransposon called tom (1,2,3). The tom element does not insert into the coding region of the genes that it mutates, but into adjacent sequences, without disrupting the signals necessary for transcription (2,4,5,6). Up to now, several Om mutants have been molecularly characterized. The Om(1D) expression is uniformly distributed in all the eye imaginal disc, however the expression is stronger in the differentiating photoreceptors preclusters posterior to the morphogenetic furrow (7). The tom element has been detected by in situ hybridization, in the preclusteers where it was found the Om(1D) gene expression. Om(1D) encodes a homeoprotein which is present seven times higher in the eye imaginal disc of the Om(1D) mutant than in the wild type. Tanda and Corces (7), proposed that a tissue-specific transcriptional enhancer present in the tom element, stimulate the expression of the Om(1D) gene when the tom element is inserted inclose proximity to it. There is evidence to suggest that Bar is the Drosophila melanogaster homologue of the Om(1D) gene (8,9). Awasaki et al. (4) found that the Om(1A) gene, is homologue to the cut homeoprotein gene of D. melanogaster (10). The Om(2D) mutant is of special interest because its gene product is not expressed in the wild type, however, it is found in the middle of the disc of the Om(2D)63 mutants, where excessive cell death occurs. It has been shown that the artificially induced ectopic expression of Om(2D) do not determine a Om(2D) phenotype (5). The aminoacidic sequence of the Om(2D) protein reveals a homeodomain that might be involved in transcription regulation events, however, its functional roll is still unknown. Yoshida and collaborators have proposed the involvement of an eye disc-specific regulatory factor present in the tom element to explain the Om(2D) gene expression only in these mutants. The Om suppressor mutants are as characteristic of the Om hypermutability system, as are the Om mutants themselves. Since all spontaneous suppressors have been found in the ca;px stock and its derivatives with the same frequency as that of Om mutations, it is thought that Om suppressors are also induced by tom element insertion (11). The studies on the Om(1J)Su locus and its function showed that the Om mutations can be suppressed by these gene. Using the in situ hybridization technique, with tom as probe, it was showed that the Om(1J)Su34 gene presents the tomelement at the position 6C on the left arm of the X chromosome, as it was suggested by Hinton (11) and verified by Matsubayashi (12). By using the "tom tagging" technique (13) 20 Kb of the Om(1J) locus region were cloned. The Northern blot analysis showed the presence of two transcripts (3.8 Kb and 2.4 Kb) within this cloned region, however, the in situ hybridization to the eye imaginal discs of wild type and mutants individuals did not show any differences in the expression. The Om suppression mechanism is now investigated by means of the genetic and molecular analyses of the revertants mutations of the Om(1J)Su34 suppressor gene. The obtained data permit an approach to the knowledge of the constitution of the Om(1J)Su region.
Nomenclature and origin of the Om mutants. The Om mutants originate from the crossing of ca ( claret eye color, linked to chromosome 2) males and px (plexus wing venation, linked to chromosome 3) females. The suppressor mutants (Su) are symbolized like other Om mutants, for example Om(1J)Su34, where (1J) indicates the X-linked Om locus and 34 refers to a particular allele of the locus. The Om(1J)Su34 mutant stock employed in this investigation was established from the crossing of copper forked49 Beadex2 whiteg females and Om(1D)9 males (Hinton, unpublished data). The Om(1J)Su34 mutation suppress semidominantly the Om(1D)9 phenotype and an almost wild type eye is observed. The revertants flies of the Om(1J)Su34 gene, symbolized as Om(1J)Su34R, were obtained in the progeny of a single Om(1J)Su34 Om(1D)9 male, irradiated with 30 Gy of g-ray from a 60Co source (Yoshida, unpublished data). The Om(1J)Su34R Om(1D)9 flies were detected because of their Om(1D)9 phenotype. To stablish homocigotes Om(1J)Su34R mutants lines, the Om(1J)Su34R Om(1D)9/Om(1J)Su34R Om(1D)9 females were selected, however, in general, these flies presented low viability, did not lead viable progeny or did not lead eggs at all. Only the Om(1J)Su34R5 Om(1D)9 females allowed to maintain a homocigote line, but it was lost before the beginning of the analyses. The crossing of Om(1J)Su34R Om(1D)9 males to C1 f g/m v f g/Y females (compound X chromosome that has two linked X chromosomes that segregate together), did not exhibit enough fertility as to maintain an homozygous Om(1J)Su34R Om(1D)9 stock. The Om(1J)Su34R stock was then mantained by selecting the mutant revertant phenotype (that could be any of these genotypes: Om(1J)Su34R Om(1D)9/Om(1J)Su34 Om(1D)9, Om(1J)Su34R Om(1D)9/Om(1J)Su34R Om(1D)9 or Om(1J)Su34R Om(1D)9/Y), in each generation. The periodic examination of the Om(1J)Su34 Om(1D)9 stock, did not revealed any new spontaneous mutation or revertant of the Om(1J)Su phenotype.
Genetic mapping of the Om(1J)Su34R mutants. The Om(1J)Su34R mutations were genetically mapped by analyzing the recombination frequency in the yellow-Om(1J) interval, in the progeny of the crossing between Om(1J)Su34R Om(1D)9 males and homozygous cut yellow Om(1J)Su34 Om(1D)9 females, symbolized as ct y Om(1J) Om(1D). As control, it was analyzed the recombination frequency for this same interval for the Om(1J)Su34 Om(1D)9 stock crossed to the yellow Om(1D)9 stock (symbolized as y Om(1D)9). Culture conditions. All the stocks and the experimental crosses were cultured in a standard agar-yeast corn meal medium at 24C. For the experimental crosses, 3-4 day-old adult virgins of each sex were selected for mating.
Scanning electron microscopy (SEM). The eyes were prepared according to the technique of Kimmel (14).
General molecular procedures. General techniques protocols and solutions recipies were done according to Sambrook et al. (15).
in situ hybridization to the polytene chromosomes with DIG labeled probes. It was done according to the method of Engels et al. (16).
Southern blot. In the procedure of Southern blot it was employed the method of Pirrota (17) modified according to the Boheringer Mannheim catalog.
Morphological analysis of the Om(1J)Su34R flie´s eyes. In the Om(1J)Su34 Om(1D)9 flies, the Om(1J)Su gene suppressed the Om(1D)9 phenotype reverting the mutant phenotype to the wild type and in the Om(1J)Su34R Om(1D)9 flies the phenotype is Om(1D)9. In the Om(1J)Su34R mutants as well as Om(1D)9 ones, there are fewer ommatidias than in the wild type, however, they have a normal cell constitution. In the Om(1J)Su34R mutants it was observed a reduction in the compound eye size and an anterior indentation around which the ortogonal characteristic array of ommatidias is disturbed. The Om(1J)Su34R mutants eyes also present an additional indentation in the posterior margen, however, as well as in Om(1D)9 flies, not always present (fig.1).
Cytological analysis of the revertants.Table 1 presents a resume of the cytological characteristics observed in the revertant´s chromosomes. In general, Om(1J)Su34R chromosomes showed various chromosomes arrangements, all of them sharing the association of chromosomes arms (Fig.2). There were no visible arrangements in the X chromosome of control larvaes. These chromosomal association made difficult the chromosome preparation extending and the identification of the chromosomes involved in those association. Om(1J)Su34R8 Om(1D)9 presented a terminal transposition of the 1A-6C segment of the X chromosome to the 24A region of 2L. In some individuals of this line, the 6C region of the XL was associated to the 24A region of the 2L, but it was not seeing any brakes nor transposition (Fig 2c and d). These data suggest that the revertion of the Om(1J)Su34 phenotype in Om(1J)Su34R8 could be attributed to the arrangments observed in the X chromosome.
In the Om(1J)Su34R7Om(1D)9 individuals, transposition events were also observed in the 6C region of the X chromosome (Table 1). Some of the flies presented the transposition of the terminal fragment of the X to chromosome 2 and also the association of chromosome 3 to the X-2 transposition site (Fig. 2).
InOm(1J)Su34R9 Om(1D)9 there were no visible rearrangements in the X chromosome, eventhough there could be puntual mutations or microdeletions in the Om(1J)Su region that are not detected by our techniques. In general, all the revertant mutatants presented small insertions of about 2 bands in lenghts in different sites of the genome, that could be due to transposition events. Fig. 2 The in situ hybridization analysis of the Om(1J)Su34R and control polytenic chromosomes with probe pBB1.9 (Fig 3) marked the position 6C of XL, the site assigned to the Om(1J) locus. However, probe pSB5.2 (Fig 3) showed multiple hybridization sites, specially in the X chromosome. The data obtained with this probe, pSB5.2 is not clear but it is possible that it contain repetitive sequences and that these results are due to the recognition of the multiple sites were this sequence is in the genome. The sequence analysis of this probe as well as the homologous regions will give evidence for this hypothesis. The revertants chromosomes were also analyzed with probe ptom28 containing the sequence of tom element (provided by Tsuchida). This probe recognize the 6C position and multiple other insertion sites in the genome of Om(1J)Su34 (control) and the Om(1J)Su34R (revertants). However, this probe was not found to be associated to the small transpositions nor the rearrangments of the revertants (data not shown).
Genetic map of Om(1J)Su34R.The Om(1J)Su34 flies does not have a visible phenotype by themselves. The can be indentified only by combination with another Om phenotype, as for example, Om(1D)9. We assigned the Om(1J)Su34R to the X chromosome using the cis combination of two Om mutations: Om(1J) and Om(1D).The position of Om(1J)Su34R in the X chromosome was found by analyzing the recombination value in the progeny from ct y Om(1J) Om(1D)9 and Om(1J)Su34R Om(1D)9 males. The genetic markers were the yellow-Om(1J) mutations. Table 2 present the data obtained from the anlysis. These data allowed as to map the Om(1J)Su34R alleles to 2.9 cM from the yellow locus (Fig 4), in concordance with the location of Om(1J) (11).
Om(1J)Su34R mutants genomic analysis The results obtained from the cytological analysis of the Om(1J)Su34R mutants, suggested that the mutations are caused by rearrangements in the Om(1J) locus. We wanted to check if the reversion of the Om(1J)Su suppressor phenotype was associated to the lost of the tom element in the region. With this purpose, different fragments of the ca;px Om(1J) region (Fig 3), were used as probes for the analysis of the DNA of the mutants flies. The genomic DNA was digested with EcoRI and HindIII restriction enzymes, determining fragments of about 4 kb and 15.5 kb in the Om(1J) region. The Southern blot data (Fig 5) indicate that there are no differences in the Om(1J)) region between the Om(1J)Su34 and Om(1J)Su34R flies. From the analysis of the region with the pBB1.9, pSB5.2 and pES5.2 probes it is concluded that all the Om(1J)Su34R mutants have the tom element inserted in a Hind III-digested fragment of about 15.5 kb. The restriction map of this region showed to be similar in the Om(1J)Su34 Om(1D)9 and Om(1J)Su34R Om(1D)9 flies. On the other hand, the hybridization with the pSB5.2 probe showed some differences (Fig 6) The pSB5.2 probe detected a deletion of about 2 Kb in a fragment of 12 Kb in the Hind III-digested DNA, moreover, there were unexpected bands of about 15 Kb and 23 Kb in the Om(1J)Su34R mutants and control flies. Due to the length of these bands, it was not possible to assign them to the Om(1J) locus because they are not equivalent in number nor size to those expected after the available restriction map of this region done by Fujioka (1995). More evidence for this expectation is given by the fact that these fragments were not detected with the pES5.2 and pBB1.9 probes that partially connect to pSB5.2 (Fig 3). According to the in situ hybridization to the polytenic chromosomes with pSB5.2 probe, these unexpected bands could correspond to genomic fragments that contain repeated sequences.
We also checked for the presence of the tom element in the pSB5.2 probe. The results show that the tom element is not part of the sequence in this probe (data not shown). A posterior analysis of the probe showed that there is at least one extra HindIII restriction size 2 Kb away from the SalI 5´end of the probe, which was not considered in the original restriction map. Even though, these results do not explain the size of the obtained fragments. Due to the differences between our data and the one originally obtained by Fujioka on the restriction map of the Om(1J) region, it was necessary to analyze all the probes respect to the presence of undetected restriction sites and the construction of a new Om(1J) restriction map. These results did not let us assign a specific region as the cause of the reversion of the Om(1J)Su34 suppressor mutation.
In Drosophila, suppressor mutations have, in general, a spontaneous origin and some of them are associated with the insertion of a transposable element into the genes. One of these classes presents structural characteristic similar to the retroviral provirus of the vertebrates. Among these suppressor mutations, the Hairy-wing, su(Hw) locus has been intensively studied in D. melanogaster. Most of su(Hw) alleles are caused by the insertion of gypsy (14,15). This retrotransposon presents its own transcription initiation signal that interacts with the regulatory sequences of adjacent genes, affecting their expression and causing the mutant phenotype (16). The studies on Om mutations suggest that it mechanism of action could be similar to su(Hw). In 1988, Dr. Hinton proposed that the mechanism by which the tomelement cause the Om mutations in D. ananassae is by an over-expression of those genes where tom inserts. In concordance with this hypothesis, it has been shown that the tom element presents it own promoter for the expression of the Om genes when activated by tissue-specific signals (17).
The Om genes suppressor effect it is observed only when the suppressor Omgenes are expressed with other Om genes; the Om(1K) gene do not suppress other mutations that affect the eye structure, as Pu and Lo or sng9 (11). The lack of information about the Drosophila suppressor genes make the Om genes and specially the Om(1J) region an interesting material for the study of the molecular mechanisms of suppressor mutations.
The analysis of Om(1J)Su34 showed that the mRNA detected in this region do not correspond to the suppressor gene. Other Om genes also present transcription domains near the tom insertion site that do not correspond to the mutated gene. The observations of Yoshida et al. (5) and Juni et al. (6) about the Om(2D) and Om(1E) genes, show that in Om(2D) there are at least four independent coding regions near the tom insertion site. One of them is the precursor gene for the OATtom near a gene do not ever promote it expression (5). In the Om(1E)53 allele, tom insertion site it is located 15 kb upstream respect to the Om(1E) transcription initiation site, and even though there are two transcripts in between this two regions, their expression do not result in a mutant phenotype (6). In Om(1A), Om(2D) and Om(1D), the site of tom insertion reside 70 Kb downstream the transcription initiation site (2,4,5).
The Om(1J) transcripts are expressed in both wild type and mutant individuals, without neither quantitative nor qualitative differences in the pattern of expression in the imaginal discs. With this data we are able to affirm that the transcripts detected in the Om(1J) region are not responsible for the suppressor effect, however their participation in the suppressor effect can not be discarded yet. The transformation of Om(1D) with a construction of hsp70 promoter and the messenger sequence, would give evidence of the function of these transcripts.
The cytological analysis of Om(1J)Su34 individuals gave additional information about the transcription domain of this gene. The brake point observed in the 6C region of the X chromosome in the Om(1J)Su34R8 and Om(1J)Su34R7 revertants reaffirm the location of the Om(1J) mutated locus to this site. This indicate that Om(1J)Su locus extends it transcription domain into this region, and that the tom element promoter effect over Om(1J)Su34R has been suppressed, possibly, due to the chromosomal rearrangements involving this region, specially the transposition involving the 6C region. Then we suppose that in Om(1J)Su34R the tom promoter effect over Om(1J)Su it is interrupted due to the separation of the Om(1J) transcription unit from the tom element. With the obtained data, it is not possible to assign the transcription unit 5´ or 3´ from the tom insertion site.
Respect to the complete reversion of the Om(1J)Su34 mutation, it is possible to propose that the revertants present a modification of the suppressor effect in the specific stage of the Om(1D)9 gene expression. There is a considerable expression of Om(1D) in the imaginal disc of the wild type and in the developing photoreceptors located posteriori to the morphogenetic furrow, where tom is also expressed (2,18). These results suggested to us a model of the mechanism by which the tom element conduce to obtain the Om(1D) mutants: early over-expression of the Om(1D) protein would cause the death of the undifferentiated cells in the region anterior to the morphogenetic furrow, without affecting the differentiating photoreceptors. It has been observed that this cellular effect it is suppressed when the Om(1D) mutation is combined with the Om(1K)Su mutations (11).
In general, the Om phenotype seems to be caused by an excessive early transcription of the Om genes (3,7,4,5) under the control of the tom element promoter effect (17). The model proposed for the suppressor effect in D. ananassae it is illustrated in Fig 7 The suppressor genes of the Om system would be activated by the tom element insertion into the Om genes (11). The early expression of the Om genes and the suppressor Om gene at the same time, would let both genes interact as in a normal development, avoiding the accumulation of the Om transcripts and allowing the eye development to continue in a normal way. The regulation of the suppressor effect would be dependent on the amount of the suppressor transcripts, in a feedback mechanism. This affirmation it is based on the experiments done by Hinton, where the Om(1J)Su suppressor effect showed to be dose-dependent: Su/Su > Su/+ > +/+ , and that the presence of extra copies of the suppressor transcript (Su/Su/Su) did not modify it effect. However, the concomitance expression of the Om suppressor genes and the Om mutations, in most of the cases do not result in a suppression of the mutant phenotype. It is supposed that the regulatory factors would act in a complementary way regulating the suppressor gene product and the tom element in the suppressed gene (Yoshida, personal communication). Even though the Om(1J)Su identification is still pendant, it is possible to assume that it gene product would be the result of the over-expression induced by the tom element promoter effect.
The analysis of the Om(1J)SuR mutations it is important in the characterization of the suppressor mutations. The Southern blot assay showed almost no differences in the mutants Om(1J) region, the cytological analysis showed the presence of various chromosomal rearrangements, some of which were around the 6C region of the X chromosome, the site assigned to the Om(1J) locus (12).
The tom element transposition frequency has not been studied yet, however, Hinton experiments (11) indicate that the frequency of Om mutants origin it is not reduced in the presence of Om suppressors. This indicate that the intrinsic functions necessary for the tom element transposition are not subject of suppression, at least in the primary oocytes, where the Om mutants originate. Then it is reasonable to think that the mobilization of these sequences in the genome is the result of transposition events.
The Om genes are normally involved in the eye development pathway, however, it similitude with D. melanogaster has been suggested just for two of them, the Om(1D) and Om(1A) genes. We do not doubt that these genes play a role in the eye developmental pathway, but it way of action and the specificity of the tom element insertion still need to be clarified.
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[Cell Biology & Cytology]![]() |
[Genetics & Bioinformatics]![]() |