| 27th June: Introduction to ImageJ | |
| 09:00 – 09:30 | Introduction – the role of image
analysis in Pathology Mohammad Ilyas |
| 09:30 – 10:15 | Basic use of imageJ and loading
ImageJ onto laptops Vincenzo Delamea |
| 10:15 – 10:45 | Tea / Coffee |
| 10:45 – 11:30 | Worked examples with ImageJ Vincenzo Delamea |
| 11:30 – 12:30 | Practical session of easy image
analysis problems Vincenzo Delamea |
| 12:30 – 15:00 | Lunch and relaxation |
| 15:00 – 15:45 | Image segmentation Qiu Guoping |
| 15:45 – 17:00 | Practical session: counting and
analysing renal glomeruli Vincenzo Delamea / TissueGnostics |
| 17:00 – 17:30 | Tea / Coffee |
| 17:30 – 18:30 | Practical session: counting and
analysing renal glomeruli Vincenzo Delamea / TissueGnostics |
| 28th June: Immunohistochemistry | |
| 09:00 – 09:45 | The challenges to evaluating
immunostaining Elton Rexhepaj |
| 09:45 – 10:30 | Practical session: evaluating
cytoplasmic and membranous staining Elton Rexhepaj |
| 10:30 – 11:00 | Tea / Coffee |
| 11:00 – 12:30 | Practical session: evaluating
cytoplasmic and membranous staining Elton Rexhepaj |
| 12:30 – 15:00 | Lunch and relaxation |
| 15:00 – 15:45 | Quantification of immunostaining
by image analysis TissueGnostics |
| 15:45 – 17:00 | Practical session: evaluating
nuclear staining TissueGnostics |
| 17:00 – 17:30 | Tea / Coffee |
| 17:30 – 18:30 | Practical session: evaluating
nuclear staining TissueGnostics |
| 29th June: Stereology | |
| 09:00 – 09:45 | Stereology for tumour analysis Paulette Herlin |
| 09:45 – 10:30 | Practical session:
quantification of numerical density Paulette Herlin and Nicolas Elie |
| 10:30 – 11:00 | Tea / Coffee |
| 11:00 – 12:30 | Practical session:
quantification of volume fraction Paulette Herlin and Nicolas Elie |
| 12:30 – 15:00 | Lunch and relaxation |
| 15:00 – 16:30 | Practical session: evaluating
fibrosis Trevor Gray |
| 16:30 – 17:00 | Tea / Coffee |
PROGRAM: ADVANCED COURSE
| 27th June | |
| 09:00 – 10:30 | Introduction to digital imaging Branimir Reljin |
| 10:30 – 11:00 | Tea / Coffee |
| 11:00 - 11.45 | Methods of image capture and
viewing Ireni Reljin |
| 11:45 – 12:30 | Storage and manipulation of
image data Vytenis Punys |
| 12:30 – 15:00 | Lunch and relaxation |
| 15:00 – 16:00 | Advanced feature extraction Phillipe Belhomme |
| 16:00 – 17:00 | Practical session:
Discriminating tumour from normal Phillipe Belhomme |
| 17:00 – 17:30 | Tea / Coffee |
| 17:30 – 18:00 | Practical session:
Discriminating tumour from normal Phillipe Belhomme |
| 28th June | |
| 09:00 – 09:45 | Multispectral imaging in
Pathology Paulette Herlin / Philippe Belhomme |
| 09:45 – 10:30 | Analysing large data sets Qiu Guoping |
| 10:30 – 11:00 | Tea / Coffee |
| 11:00 – 11:45 | Grid computing in image
analysis Klaus Kayser |
| 11:45 – 12:30 | Integrating Pathology data with
other clinical data Vytenis Punys |
| 12:30 – 15:00 | Lunch and relaxation |
| 15:00 – 17:00 | Practical session: Integrating
Matlab and ImageJ Elton Rexhepaj |
| 17:00 – 17:30 | Tea / Coffee |
| 17:30 – 18:30 | Practical session: Integrating
Matlab and ImageJ Elton Rexhepaj |
| 29th June | |
| 09:00 – 10:30 | Practical session: 3D
reconstruction in pathology Alain Pitiot |
| 10:30 – 11:00 | Tea / Coffee |
| 11:00 – 12:30 | Practical session: 3D
reconstruction in pathology Alain Pitiot |
| 12:30 – 15:00 | Lunch and relaxation |
| 15:00 – 16:30 | Workshop: Using Slidepath for
managing TMAs and
immunohistochemistry Mohammad Ilyas / Peter Riegman |
| 16:30 – 17:00 | Tea / Coffee |
